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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933536.1_cds_XP_016479787.1_71292
CDS Infomation

[gene=LOC107801038] [db_xref=GeneID:107801038] [protein=shaggy-related protein kinase zeta isoform X2] [protein_id=XP_016479787.1] [location=join(2843..2845,2928..3020,3244..3303,3379..3651,3735..3809,3918..3974,4070..4210,4313..4363,4455..4550,4679..4762,4953..5054,6144..6239)] [gbkey=CDS]
Sequence

ATGGAAATGTCAGCTGCCGCTGTTGAGGGTAATGGTGCTGTCACTGGTCACATTATTTCA
ACCACAATTGGAGGCAAGAATGGAGAACCAAAAAGGACCATCAGTTACATGGCAGAGCGA
GTTGTCGGTACAGGATCATTTGGAATAGTGTTTCAGGCAAAATGCTTGGAAACTGGAGAG
ACCGTGGCCATAAAGAAGGTTTTGCAGGATAAACGGTATAAAAATCGTGAACTACAGCTG
ATGCGCTTGATGGATCACCCAAATGTCATTTCTCTAAAGCACTGCTTCTTTTCCACGACA
AGTAGAGACGAACTTTTCCTTAATTTGGTCATGGATTATGTCCCTGAAAGTTTATACAAG
GTTTTAAGGCACTATAGCAATTCAAACCAAAGGATGCCACTCATCTATGTCAAACTTTAT
ATGTATCAGATATTCAGGGGGCTGGCTTACATTCATAATGTTCCAAGAATTTGCCATAGA
GATGTGAAACCACAAAATCTTTTGGTTGATCCTCTGACCCATCAAGTCAAGCTTTGTGAC
TTTGGAAGTGCAAAAGTCCTGGTGAACGGTGAAGCAAATATTTCATACATTTGCTCTCGC
TACTACAGAGCTCCAGAACTCATATTTGGTGCCACAGAATATACAACAGCAATTGATATT
TGGTCAGCTGGATGTGTTCTTGCTGAGCTTCTTCTGGGGCAGCCACTCTTTCCCGGCGAA
AATGCTGTAGACCAAATTGTAGAGATTATCAAGGTCCTTGGTACTCCTACTCGAGAAGAA
ATTCGATGTATGAACCCAAATTACACGGATTTCAGATTCCCACAGAGAAAAGCTCATCCT
TGGCACAAGGTATTCCACAAAAGAATGCCCCCTGAAGCAATTGATCTTGCTTCACGGCTT
CTCCAATATTCACCAAGTCTTCGCTGTACCGCGCTAGAAGCGTGTGCACATCCATTCTTT
GATGAGCTTCGTGAGCCCAATGCCCGTCTCCCGAATGGACGTCCATTTCCACCTCTTTTC
AACTTCAAACAGGAATTAACTGGAGCTTCACCTGATTTGGTAAGCAAGCTGATCCCTGAG
CATGTTTGGAGGCAAACTGGTTTGAATTTTCCCTATCCCGGTGCGACGTAA

Peptide Sequence

PEP ID

XP_016479787.1
PEP Infomation

PREDICTED: shaggy-related protein kinase zeta isoform X2 [Nicotiana tabacum]
Sequence

MEMSAAAVEGNGAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGE
TVAIKKVLQDKRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMDYVPESLYK
VLRHYSNSNQRMPLIYVKLYMYQIFRGLAYIHNVPRICHRDVKPQNLLVDPLTHQVKLCD
FGSAKVLVNGEANISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGQPLFPGE
NAVDQIVEIIKVLGTPTREEIRCMNPNYTDFRFPQRKAHPWHKVFHKRMPPEAIDLASRL
LQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELTGASPDLVSKLIPE
HVWRQTGLNFPYPGAT

Transcript Sequence

Gene sequence data has not been registered.